maldi-tof ms protein dendrogram Search Results


maldi-tof ms protein dendrogram  (Bruker Corporation)
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Bruker Corporation maldi-tof ms protein dendrogram
A. <t>Dendrogram</t> showing distances and grouping of Campylobacter isolates based on protein phenotypes created using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). The 2 major subclades of C. jejuni subsp. jejuni are designated M1 and M2. Isolates with similar letters (A–E) had identical 16S ribosomal (r)DNA sequences. Color-coding refers to 3 clades seen in the distance matrix tree. B. Phylogenetic relationships of 13 C. jejuni subsp. jejuni isolates determined by whole genome sequence analysis. Three clades are identified (WGS1, WGS2, WGS3) in the distance matrix tree, and isolates with identical 16S rDNA sequences are identified as above (A–E).
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A. Dendrogram showing distances and grouping of Campylobacter isolates based on protein phenotypes created using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). The 2 major subclades of C. jejuni subsp. jejuni are designated M1 and M2. Isolates with similar letters (A–E) had identical 16S ribosomal (r)DNA sequences. Color-coding refers to 3 clades seen in the distance matrix tree. B. Phylogenetic relationships of 13 C. jejuni subsp. jejuni isolates determined by whole genome sequence analysis. Three clades are identified (WGS1, WGS2, WGS3) in the distance matrix tree, and isolates with identical 16S rDNA sequences are identified as above (A–E).

Journal: Journal of Veterinary Diagnostic Investigation : Official Publication of the American Association of Veterinary Laboratory Diagnosticians, Inc

Article Title: Comparative analysis of Campylobacter isolates from wild birds and chickens using MALDI-TOF MS, biochemical testing, and DNA sequencing

doi: 10.1177/1040638718762562

Figure Lengend Snippet: A. Dendrogram showing distances and grouping of Campylobacter isolates based on protein phenotypes created using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS). The 2 major subclades of C. jejuni subsp. jejuni are designated M1 and M2. Isolates with similar letters (A–E) had identical 16S ribosomal (r)DNA sequences. Color-coding refers to 3 clades seen in the distance matrix tree. B. Phylogenetic relationships of 13 C. jejuni subsp. jejuni isolates determined by whole genome sequence analysis. Three clades are identified (WGS1, WGS2, WGS3) in the distance matrix tree, and isolates with identical 16S rDNA sequences are identified as above (A–E).

Article Snippet: The MALDI-TOF MS dendrogram clades containing our 27 isolates indicated complete agreement with the species assignments described above. shows the MALDI-TOF MS protein dendrogram for the 27 Campylobacter isolates, as well as the Bruker Daltonik reference library (Bruker Daltonics) spectra for C. jejuni, C. coli, C. lari, C. peloridis , and C. avium .

Techniques: Mass Spectrometry, Sequencing